| EST name | EST sequence |
| gi|24484331|gb|BW127932.1|BW127932 | ATACAACGAAAAAAAAAAGTGTTTAAGTAGGATTTTTATAACGTGGCTTGGAAATGTACGTGCTTTGCATGCAGGTTTTT GATGATAACACGCGCGCCTGCGAAAAATAACCGTCTTGCACGGGCCANATCCCATCAGGAACTGCCATACTCTGCAGACT AGTCAAGTACACCGCAATTAAATATCCTGCAACCAATTAACACCAAATGTTAAAGCAATGTATATAAGTTATACATTGAT TAAAGCTACTTCAGCTAAACTAATGGATCTGTGATGGCCTTACTAGGATCACAAGTAAACGAAATGGTCACAGCGTACCG CACGCCTTCTACAACCTTCTGGACATGATGGGGATTTTCTGAGCCCGATGTAAAAAAAGATACGCGCCCATTTCTTGGCT CAATTACCACTTCTTCATTGTTGTATGTAGTTTTATCAAAAACAAACTGCCCGCCTTTAAAATCACTTCCATAGTCTGCT ANATAGAGTAATGAGGTGTAGTCAAATGAGCCATATTGTATTTTATCAACATGGAAATGCCAATATTCATCATGCTGTGT TTTAGCTGGAGTTGTTGTCATTCTTGAGAAAAAAGTGGGGTTGGTTAAATGCAGCTTTTTCGGGTCTAAACCGAATTCAT TTGCG |
Most similar to sp|Q5XGE0|CQ101_XENTR
>>sp|Q02154|GLNA2_RHILP Glutamine synthetase 2 OS=Rhizobium
leguminosarum bv. phaseoli GN=glnII PE=1 SV=3
Length = 326
Score = 111 bits (278), Expect(2) = 4e-24
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
Frame = -3
Query: 728 GVVVTFDPKPIPG-DWNGAGAHTNYSTKSMRNEGGYEVIKAAIEKLKLRHKEHIAAYGEG 552
G+ + + KP+ DWNG+G H N+STK +R GG E +A + +HIA YG
Sbjct: 206 GIDIEYHCKPLGDTDWNGSGMHCNFSTKYLREVGGKEYFEALMASSDKNLMDHIAVYGPD 265
Query: 551 NERRLTGRHETADINTFSWGVANRGASVRVGRETEQNG-KGYFEDRRPASNMDPYVV 384
N++RLTG+HETA N FS+GVA+RGAS+RV +N KGY EDRRP S DPY +
Sbjct: 266 NDKRLTGKHETAPWNKFSYGVADRGASIRVPHSFIKNDYKGYLEDRRPNSQGDPYQI 322
Score = 21.2 bits (43), Expect(2) = 4e-24
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -2
Query: 774 QVWVARYILR 745
Q+W+ARY+L+
Sbjct: 190 QIWMARYLLQ 199
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q08682|RSSA1_ARATH 40S ribosomal protein Sa-1 OS=Arabidopsis
thaliana GN=RPSaA PE=1 SV=3
Length = 298
Score = 122 bits (307), Expect(3) = 4e-42
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP
Sbjct: 28 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 85
Score = 54.7 bits (130), Expect(3) = 4e-42
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 86 MATNGSASSAQLSQKEADVRMMCAAEVIL 172
MATNGSASSAQLSQKEADVRMMCAAEV L
Sbjct: 1 MATNGSASSAQLSQKEADVRMMCAAEVHL 29
Score = 34.3 bits (77), Expect(3) = 4e-42
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 86 YGQRAVLKFAQYTGA 100
>sp|Q9ZSR8|RSSA_BRANA 40S ribosomal protein SA OS=Brassica napus
GN=LRP PE=2 SV=1
Length = 292
Score = 120 bits (302), Expect(3) = 4e-37
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKL MAARVIVAIENPQDIIVQSARP
Sbjct: 25 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIVAIENPQDIIVQSARP 82
Score = 39.7 bits (91), Expect(3) = 4e-37
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2
Query: 86 MATNGSASSAQLSQKEADVRMMCAAEVIL 172
MA NGS QLSQKEAD++MMCAAEV L
Sbjct: 1 MAANGST---QLSQKEADIKMMCAAEVHL 26
Score = 34.3 bits (77), Expect(3) = 4e-37
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 83 YGQRAVLKFAQYTGA 97
>sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max PE=2
SV=1
Length = 310
Score = 115 bits (288), Expect(3) = 2e-33
Identities = 53/58 (91%), Positives = 57/58 (98%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNC++QMERY+FKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARP
Sbjct: 31 HLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARP 88
Score = 34.3 bits (77), Expect(3) = 2e-33
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 89 YGQRAVLKFAQYTGA 103
Score = 32.7 bits (73), Expect(3) = 2e-33
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 89 ATNGSASSA-QLSQKEADVRMMCAAEVIL 172
ATN +A+ QLSQKEAD++MM AA+V L
Sbjct: 4 ATNAAAAPPRQLSQKEADIQMMLAADVHL 32
>sp|Q8H173|RSSA2_ARATH 40S ribosomal protein Sa-2 OS=Arabidopsis
thaliana GN=RPSaB PE=1 SV=2
Length = 280
Score = 115 bits (289), Expect(3) = 9e-33
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNCNYQMERYVFKRR+DGIYI NLGKTW+KLQMAARVIVAIENP+DIIVQSARP
Sbjct: 29 HLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDIIVQSARP 86
Score = 32.7 bits (73), Expect(3) = 9e-33
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTG 380
YGQRAVLKFAQYTG
Sbjct: 87 YGQRAVLKFAQYTG 100
Score = 31.6 bits (70), Expect(3) = 9e-33
Identities = 16/30 (53%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = +2
Query: 86 MATNGSASSA-QLSQKEADVRMMCAAEVIL 172
MA NG A++ Q+S+KEAD++MM +A+V L
Sbjct: 1 MAANGVATAGRQVSEKEADIQMMLSADVHL 30
>sp|A5BUU4|RSSA_VITVI 40S ribosomal protein SA OS=Vitis vinifera
GN=GSVIVT00034021001 PE=3 SV=1
Length = 312
Score = 116 bits (290), Expect(3) = 4e-32
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENP+DIIVQSARP
Sbjct: 24 HLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPKDIIVQSARP 81
Score = 34.3 bits (77), Expect(3) = 4e-32
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 82 YGQRAVLKFAQYTGA 96
Score = 27.3 bits (59), Expect(3) = 4e-32
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 119 LSQKEADVRMMCAAEVIL 172
LSQKE D++MM AAEV L
Sbjct: 8 LSQKEQDIQMMLAAEVHL 25
>sp|O65751|RSSA_CICAR 40S ribosomal protein SA OS=Cicer arietinum
GN=RAP40 PE=2 SV=1
Length = 300
Score = 110 bits (276), Expect(3) = 6e-32
Identities = 50/58 (86%), Positives = 55/58 (94%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNCN+QMERY+FKRRNDGIYI NLGKTW+KL +AAR+IVAIEN QDIIVQSARP
Sbjct: 27 HLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARIIVAIENSQDIIVQSARP 84
Score = 34.3 bits (77), Expect(3) = 6e-32
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 85 YGQRAVLKFAQYTGA 99
Score = 32.3 bits (72), Expect(3) = 6e-32
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2
Query: 86 MATNGSASSAQLSQKEADVRMMCAAEVIL 172
MAT +A S QL+QKEAD++MM AA+V L
Sbjct: 1 MATT-TAPSRQLTQKEADIQMMLAADVHL 28
>sp|O80377|RSSA_DAUCA 40S ribosomal protein SA OS=Daucus carota
GN=179B PE=2 SV=1
Length = 297
Score = 112 bits (281), Expect(3) = 7e-32
Identities = 52/58 (89%), Positives = 56/58 (96%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL +AARVIV+IENPQDIIVQSARP
Sbjct: 24 HLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVSIENPQDIIVQSARP 81
Score = 34.3 bits (77), Expect(3) = 7e-32
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 82 YGQRAVLKFAQYTGA 96
Score = 30.0 bits (66), Expect(3) = 7e-32
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 101 SASSAQLSQKEADVRMMCAAEVIL 172
++ + +LS EAD++MMCAAEV L
Sbjct: 2 ASGARELSTMEADIQMMCAAEVHL 25
>sp|Q01CH5|RSSA_OSTTA 40S ribosomal protein SA OS=Ostreococcus tauri
GN=Ot03g03270 PE=3 SV=2
Length = 287
Score = 98.6 bits (244), Expect(3) = 2e-26
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKN ++QMERYV+KRR DGI+I NLGKTW+KL +AARVIVA+ENPQD+I Q+ARP
Sbjct: 21 HLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVAVENPQDVIAQAARP 78
Score = 34.3 bits (77), Expect(3) = 2e-26
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 79 YGQRAVLKFAQYTGA 93
Score = 25.8 bits (55), Expect(3) = 2e-26
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 116 QLSQKEADVRMMCAA 160
Q+SQKEAD+ MM AA
Sbjct: 4 QMSQKEADIAMMLAA 18
>sp|A4RUK2|RSSA_OSTLU 40S ribosomal protein SA OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_12355 PE=3 SV=1
Length = 290
Score = 95.1 bits (235), Expect(3) = 2e-25
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKN ++QMERYV+KRR DGI+I NLG+TW+KL +AAR+IVA ENPQD+I Q+ARP
Sbjct: 21 HLGTKNVDFQMERYVWKRRADGIHIINLGRTWDKLMLAARIIVACENPQDVICQAARP 78
Score = 34.3 bits (77), Expect(3) = 2e-25
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 339 YGQRAVLKFAQYTGA 383
YGQRAVLKFAQYTGA
Sbjct: 79 YGQRAVLKFAQYTGA 93
Score = 25.8 bits (55), Expect(3) = 2e-25
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 116 QLSQKEADVRMMCAA 160
Q+SQKEAD+ MM AA
Sbjct: 4 QMSQKEADIAMMLAA 18
>sp|A8IB25|RSSA_CHLRE 40S ribosomal protein SA OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_126059 PE=3 SV=1
Length = 279
Score = 101 bits (251), Expect(2) = 6e-24
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +1
Query: 166 HLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 339
HLGTKNC+YQMERY+++RR DGIYI NL KT+EKLQMAAR+IVAIENPQDI V SARP
Sbjct: 19 HLGTKNCHYQMERYMYRRRQDGIYIINLEKTYEKLQMAARIIVAIENPQDICVLSARP 76
Score = 28.9 bits (63), Expect(2) = 6e-24
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 339 YGQRAVLKFAQYTG 380
YGQRAV KFAQY G
Sbjct: 77 YGQRAVFKFAQYLG 90
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q5XGE0|CQ101_XENTR PKHD domain-containing transmembrane protein
C17orf101 homolog OS=Xenopus tropicalis PE=2 SV=1
Length = 317
Score = 166 bits (419), Expect = 2e-40
Identities = 79/127 (62%), Positives = 91/127 (71%)
Frame = -2
Query: 644 ANEFGLDPKKLHLTNPTFFSRMTTTPAKTQHDEYWHFHVDKIQYGSFDYTSLLYXADYGS 465
A F + LHLT PTFFSRM ++ AKT HDEYWH H+DK+ YGSFDYTSLLY +DY
Sbjct: 191 ARTFNISVSSLHLTKPTFFSRMNSSEAKTAHDEYWHPHIDKVTYGSFDYTSLLYLSDYSQ 250
Query: 464 DFKGGQFVFDKTTYNNEEVVIEPRNGRVSFFTSGSENPHHVQKVVEGVRYAVTISFTCDP 285
DF GG+FVF N +EPR GR+SFFTSGSEN H V+KV G RYA+TISFTC+P
Sbjct: 251 DFGGGRFVFIDEGANR---TVEPRTGRLSFFTSGSENLHRVEKVSWGTRYAITISFTCNP 307
Query: 284 SKAITDP 264
AI DP
Sbjct: 308 EHAIGDP 314